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  DISCLAIM ALL WARRANTIES RELATING TO THIS SOFTWARE
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Author: Grand Roman Joldes
E-mail : grand.joldes@uwa.edu.au

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Automatic AAA wall extraction instructions

--- Setup:

Copy ExtractWall.bat and ExtractWall.py in the Segmentation_CT directory

You should have the following files in the same directory: 
CT_cropped_isotropic.nrrd, CT_AAA_label.nrrd and CT_blood_label.nrrd

Change the path to Slicer.exe in ExtractWall.bat according to your computer's configuration.

--- Running:
 
Run ExtractWall.bat (double click or run it from a command window). 
It must be run from the Segmentation_CT directory !

--- Output

CT_wall.vtp and CT_Wall_label.nrrd

--- Debug

You can comment exit(errorcode) in ExtractWall.py (place a # in front of that line). This will prevent 
Slicer from closing. You can then open the Python Interactor (View->Python Interactor or Ctrl+3) and
check the output messages.

